Browse of TCMCG006C28351 protein

CDS

Accession Number	TCMCG006C28351
gbkey	CDS
Protein Id	XP_022548289.1
Location	join(11896647..11896901,11897094..11897370,11897507..11898561,11898641..11898931,11899008..11899212,11899302..11899576,11899670..11899968,11900079..11901183,11901271..11901417,11901507..11901587,11901675..11901900,11901989..11902128,11902215..11902321,11902411..11902513)
Gene	LOC111198163
GeneID	111198163
Organism	Brassica napus

Protein

Length	1521aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022692568.1
Definition	E3 ubiquitin-protein ligase UPL1-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	KO
Description	E3 ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10592        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005739        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCTGCGGTCGAATCATGATTCCATGACCGCTGATCATGCGGAGAATTTTGGCGGTTCCCACACTTTTGTTGGTTCAGAAGATGTGACAGATGACATGGAGCATGATCAAGACTTGGATGAAGGATTTGCCGCAGGTGGGGATGATTATATGCAAGAAGCAGCTGAGGATGCTAGGGGGTTGGAAAACGGGATTGGGTCGATGGGTATAGAGTTTGAGATGCATACCCACGTGCAGGAAAATCTTGATGAAGAGGATGAAGAGGACGAAGATGATGAAGATCGGGTAATTCTCAGGTTTGAGGATGGATTCAATGGGCTAAACGTTCTTGATCATTTGGAGGTTCTTAGAGATCATAGATTTTCCGATGAAACACTTCATGTAATGCCTGTTGAAGTGTTTGGCTCGAGACGTCAAGGACGAACAACTTCTATTTACAGCCTTCTTGGCAGAACTGGGGATGGTGCTACTCCTTCACAGCATCCTCTTTTATCGGGATCTCCATCACTTCCAGCGTCGCAAAGTCAAACAGAAAGCACACATGATCATACTGTTGGAGGTAGGGATTCCAACGGTAGTTCTTCGTCACGGCTGGATGCTATATTCCGATCTTTGAGGAATGGCCGGCAGGGGCATCGTTTGAATTTATGGGCTGATGACAGCCAGCAAATTGTTGGATCTGGCGCTTCTACCGTACCACAAGGCCTTGAAGATTTGCTGGTATCTCAGTTGAGACGTCCCGGCTCTGATAATCCTTCTGATCAGAATCCATCACCTTTGGAACCCCAGTCACAGGCCGAGAGTGGGCAGCCACAGGAGGCAACTGTCAGACCTGAAATTCCAGATGAAAACGCCACTGATAATGGAGGTGCCAATGTGTCTGCTCCCTCTATCGTTTCGCCAGTTGCATCTGCTACCCCGGATACACGAGCCCCTGCTACTGATTCTGTCTCAAGCTCGCGGTCTCAGTCAGTCGAAATGCAATATGATCCAAATGATTCAACTGTTCGGGATGTTGAAGCGGTGAGTCAAGAAAGCGGTGGGAGTGGGGCAACCTTGGGTGAAAGCCTTAGGAGTTTGGATGTTGAGATTGGAAGTGCTGATGGACATGATGATGGTGGAGAAAGGCATGATGTACAGCCAGCTATACGCTCAAGAAGAGCAAATTTGTCACTTGTGCCATCTTCAACTGGGCGAGAAGCTTCTCTTTATAGTGTAACTGAGGTTCCTGAGAACTCCGGTCACGAGGCCGAGCAGGATAATCCACCAGAGGAGCAACCAGTTAACAGGGATGTTGCTTCTAGTTCTATTGATCCTGCATTTTTAGATGCCCTACCTGAGGGACTGCGAGCTGAAGTCCTTTCAGCTCAGCAAGGTCAAGCGCCAGAACCTTCTAGCAATGAACAGCAGAATTCTGGAGATATTGATCCGGAGTTTCTTGCTGCACTTCCTGCTGATATACGAGCTGAAGTTCTGGCACAGCAACAAGCACAACGGGTTCATCAGTCTCATGAACTTGAAGGTCAGCCTGTCGAGATGGACACCGTTTCAATAATTGCAACGTTTCCTTCGGAGTTGCGAGAAGAGGTGTTGCTGACGTCAGATGATGCCGTTCTTGCAAATTTAACACCTGCACTGGTTGCGGAAGCAAACATGTTGCGTGAAAGGTTTGCTCATCGATACCATAACCGTGCACTTTTTGGTATGCATCCAAGACATCGTAGAGGGGAGGCATCCAGGCGAGGTGAAGGTGTCATATCTGGAAATGAGGGGATTGCTTCTCGTAGGTCTGCTGCAAAGGTTATAGAGGCCGCTGGAGCTCCCCTAGTTAACACTGAGGCACTCCAAGCAATGATTCGTGTTCTTCGGATAGTTCAGCCTCTTTACAAGGGTCCTCTGCAGAGGCTTTTGCTGAATTTATGTTCTCATGGCGAAACAAGGTTTTCCTTGGTTAATACATTCATGGATATGCTGATGCTCGACACAAGGAAGCCTGTTAACTACTCGAGTGTTTCCGAACCACCTTATCGTCTTTATGCTTGTCAAAGCAATGTAACATATTCACGTCCTCAGCACTTTGATGGGGTTCCTCCTCTAGTGTCTCGGCGTGTCCTTGAGACTTTGACATATTTGGCACGAAATCATATATACGTAGCAAAGATTCTGCTTCAATCCAGGCTTTCCCTGCCTTCCCTTCAAGGTTCAGTACCCTCAGACAAGGCACGTGGAAAAGCTGTTGTAGTAAGTGATGATCACATGAGCAGAACGCAGCAGGAACCCGAATCTGTAGCCTTTGCGTTGCTTCTAAGCCTCCTGAATCAGCCCCTTTATTTGAGAAGTGTGGCTCATCTTGAACAGCTGCTGAACTTACTGGAGGTCATCATTGACAACGCTGAACGAAAGTCTGAGTCAGCTGACGGATCAGATGGGTCTGCCAGCGAGCAGCAATCAACGCATCAAGCATTAGAAGTTGAAAACAATTCAGAAAACCACGATATGGTATCTGGCACTGTACCTGCTGGTACAGTGACCAAGCCAATTGTCTCATCTGGAAGTTCGTCCAACAGAGCAGAGAGTGGATGTGATGTTCATACTGTGTTGCTTAATCTTCCCCAGTCAGAGCTGTGTCTGCTTTGTTCATTACTTGCACGTGAAGGTTTGTCAGATAATGCATACACCCTTGTAGCGGAGGTGCTGAAAAAACTTGTGGCCATTGCTCCAAGCCATTGTCATTTGTTTATCACAGAGCTTGCAAACGCAATACAGAACCTGACAAGATCAGCGATCAGTGAACTTCACATGTTCGGTGAAGCCGTAAAAACGCTTCTAAGTACCACGTCATCAGATGGATCAGGAGTACTGAGGGTTTTGCAGGCATTAAGCTCCCTCGTTGATTCGTTGTTAATCACAAAAGAGAAGAATTCCGAAGAGCATGTTGCTGTGTTTTCTCAGCTATCGAACATCAATTTAGCTTTGGAACCTCTGTGGCTGGAGTTGAGCAATTGCATATGCAAAATTGAGGGGCATTCTGATTCTGCTTCTGTTACTACGACGTCTCCAACAACCTCGATGAGTTCAGCAACAACAAGGGGAGCTGGAGTAAGCCAGTCACTTCCTGCTGGTGCCCAAAACATGTTGCCTTATGTAGAGTCGTTTTTTGTTACCTGTGAGAAATTGCATCCATCATCACAGTCTTGTGATATCTCGGTTCCCATGGCTTCTTCTGATGCTGAGGAGCAGCCCAAGGGTCCAGGACCAAGCAGCAGCTCCAAGGTGGATGAGAAATACGGTTCTTTTATCAAGTTTTCTGAAAGGCACAGGAAACTTCTTAATGCTTTCATCCGACAAAATCCTGCTCTGCTTGAGAAGTCCTTTTCGCTAATGCTCAAGGTTCCACGTTTTATTGAATTTGATAACAAACGTGCATACTTCAGATCAAAGATAAAACACCAGCATGACCATCACCATAGCCCTTTGAGAATCTCAGTGAGAAGAGCCTACATTCTTGAAGATTCATACAACCAATTGCGAATGAGGTCAACTCAGGAACTGAAAGGTAGATTGACTGTTCACTTCCAAGGAGAAGAAGGTATTGATGCTGGTGGGCTTACCAGGGAATGGTATCAGCTGTTGTCAAGGGTTATTTTTGACAAAGGAGCTCTTCTGTTCACAACCGTTGGCAATGACTCGACTTTCCAACCGAATCCAAACTCTGTTTACCAGACAGAGCACCTCTCCTACTTCAAATTCGTTGGCCGGGTGGTTGGAAAAGCTCTGTTTGATGGTCAACTACTTGACGTCCATTTCACTCGCTCTTTTTACAAGCATATCTTGGGAGTTAAGGTCACGTACCATGATATTGAAGCTATAGATCCCGATTACTATAAAGCCCTGAAATGGATGCTGGAGAATGATATTAGCGATGTCCTAGATCTCACTTTTAGCGTTGATGCTGATGAGGAAAAGCTAATACTGTATGAAAAAACGGAGGTGACCGACCATGAACTGATCCCTGGAGGGCGGAACATTAAAGTTACTGAGGAGAATAAGCATGAATATGTAGACCTAATCGCCGAGCATCGATTAACCACAGCCATTCGTCCTCAGATAAATGCATTCCTGGAAGGGTTTAGTGAACTTATCCTTAAAGATCTAATATCGATTTTTAACGACAAGGAACTGGAGTTATTAATAAGTGGTCTTCCTGATATCGACTTGGATAACCTGAGGGTGAATACTGAATATTCTGGGTATAGTCCTGGATCCCCTGTTATCCAGTGGTTCTGGGAGGTTGTTCAGGGATTGAGCAAAGAAGACAAAGCCCGTCTATTGCAGTTTGTGACTGGAACCTCTAAGGTACCTCTGGAAGGATTTAGTTCCCTTCAAGGAATTTCAGGGGCACAGAAGTTTCAGATCCACAAGGCATATGGAAGCGCTAATCACTTGCCGTCTGCTCATACCTGTTTCAATCAGTTAGATCTGCCAGAGTACCCGTCTAAGGAACATCTGCAGGAGAGGCTGCTGCTTGCAATCCATGAAGCAAGTGAAGGATTCGGATTTGGTTAA

Protein:   MLRSNHDSMTADHAENFGGSHTFVGSEDVTDDMEHDQDLDEGFAAGGDDYMQEAAEDARGLENGIGSMGIEFEMHTHVQENLDEEDEEDEDDEDRVILRFEDGFNGLNVLDHLEVLRDHRFSDETLHVMPVEVFGSRRQGRTTSIYSLLGRTGDGATPSQHPLLSGSPSLPASQSQTESTHDHTVGGRDSNGSSSSRLDAIFRSLRNGRQGHRLNLWADDSQQIVGSGASTVPQGLEDLLVSQLRRPGSDNPSDQNPSPLEPQSQAESGQPQEATVRPEIPDENATDNGGANVSAPSIVSPVASATPDTRAPATDSVSSSRSQSVEMQYDPNDSTVRDVEAVSQESGGSGATLGESLRSLDVEIGSADGHDDGGERHDVQPAIRSRRANLSLVPSSTGREASLYSVTEVPENSGHEAEQDNPPEEQPVNRDVASSSIDPAFLDALPEGLRAEVLSAQQGQAPEPSSNEQQNSGDIDPEFLAALPADIRAEVLAQQQAQRVHQSHELEGQPVEMDTVSIIATFPSELREEVLLTSDDAVLANLTPALVAEANMLRERFAHRYHNRALFGMHPRHRRGEASRRGEGVISGNEGIASRRSAAKVIEAAGAPLVNTEALQAMIRVLRIVQPLYKGPLQRLLLNLCSHGETRFSLVNTFMDMLMLDTRKPVNYSSVSEPPYRLYACQSNVTYSRPQHFDGVPPLVSRRVLETLTYLARNHIYVAKILLQSRLSLPSLQGSVPSDKARGKAVVVSDDHMSRTQQEPESVAFALLLSLLNQPLYLRSVAHLEQLLNLLEVIIDNAERKSESADGSDGSASEQQSTHQALEVENNSENHDMVSGTVPAGTVTKPIVSSGSSSNRAESGCDVHTVLLNLPQSELCLLCSLLAREGLSDNAYTLVAEVLKKLVAIAPSHCHLFITELANAIQNLTRSAISELHMFGEAVKTLLSTTSSDGSGVLRVLQALSSLVDSLLITKEKNSEEHVAVFSQLSNINLALEPLWLELSNCICKIEGHSDSASVTTTSPTTSMSSATTRGAGVSQSLPAGAQNMLPYVESFFVTCEKLHPSSQSCDISVPMASSDAEEQPKGPGPSSSSKVDEKYGSFIKFSERHRKLLNAFIRQNPALLEKSFSLMLKVPRFIEFDNKRAYFRSKIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQELKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDSTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYYKALKWMLENDISDVLDLTFSVDADEEKLILYEKTEVTDHELIPGGRNIKVTEENKHEYVDLIAEHRLTTAIRPQINAFLEGFSELILKDLISIFNDKELELLISGLPDIDLDNLRVNTEYSGYSPGSPVIQWFWEVVQGLSKEDKARLLQFVTGTSKVPLEGFSSLQGISGAQKFQIHKAYGSANHLPSAHTCFNQLDLPEYPSKEHLQERLLLAIHEASEGFGFG